BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB011H03SP1|AL426277
(813 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1795 1591 0.0
>3x_Contig1795
Length = 38452
Score = 1591 bits (802), Expect = 0.0
Identities = 810/812 (99%), Gaps = 1/812 (0%)
Strand = Plus / Minus
Query: 2 tttctccgccatttttagatctcttaccaccaaatccttttaatagacggctacccttaa 61
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5100 tttctccgccatttttagatctcttaccaccaaatccttttaatagacggctaccctta- 5042
Query: 62 gataacccccctgtcatagcgccaacaccagcaccagttaccccggcaccgacttgggcg 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5041 gataacccccctgtcatagcgccaacaccagcaccagttaccccggcaccgacttgggcg 4982
Query: 122 acaccactcacggtatcaacaccaaagttggcgacatttccaacagcctttagggatgca 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4981 acaccactcacggtatcaacaccaaagttggcgacatttccaacagcctttagggatgca 4922
Query: 182 ccagctaacccaccttcactgacatcaacaggtggtctgttgtaatttggaatgaaagta 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4921 ccagctaacccaccttcactgacatcaacaggtggtctgttgtaatttggaatgaaagta 4862
Query: 242 gacttgaatttgacagttccttgtgggcttaatttcaaggtgaaagattcttccttcttt 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4861 gacttgaatttgacagttccttgtgggcttaatttcaaggtgaaagattcttccttcttt 4802
Query: 302 ggggtcatatcgcgtacatcccactccgtctcagccaataaatcattagagcctgccctg 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4801 ggggtcatatcgcgtacatcccactccgtctcagccaataaatcattagagcctgccctg 4742
Query: 362 tcccagtcatagacttggacagcaatcttgttcctggacctcgatgggactgggagttta 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4741 tcccagtcatagacttggacagcaatcttgttcctggacctcgatgggactgggagttta 4682
Query: 422 accttttcgttccaaacaggattcaatgttttcttaactacagccgattggaagatcttt 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4681 accttttcgttccaaacaggattcaatgttttcttaactacagccgattggaagatcttt 4622
Query: 482 tccccatcaattctcacgataatcataggatctgatttgccatttctgtcatgacttggt 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4621 tccccatcaattctcacgataatcataggatctgatttgccatttctgtcatgacttggt 4562
Query: 542 acatcatcagcagagatgaacgtggtatccaaaataccagtatcgagtacagtttctgat 601
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4561 acatcatcagcagagatgaacgtggtatccaaaataccagtatcgagtacagtttctgat 4502
Query: 602 aatggcaattcaatagcagttggattgaataawagtctgattttgacttgggctccattt 661
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 4501 aatggcaattcaatagcagttggattgaataaaagtctgattttgacttgggctccattt 4442
Query: 662 ttgaaactaatggtggttgggtcctcaatagcttcctttaatactgatgaggttgaaaca 721
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4441 ttgaaactaatggtggttgggtcctcaatagcttcctttaatactgatgaggttgaaaca 4382
Query: 722 gtggtttcagtgacgacatcatcaacattcttaacgattggtttcttcgtaatacggaag 781
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4381 gtggtttcagtgacgacatcatcaacattcttaacgattggtttcttcgtaatacggaag 4322
Query: 782 gtcatagtgctgtgcttcaaatcacgaacaaa 813
||||||||||||||||||||||||||||||||
Sbjct: 4321 gtcatagtgctgtgcttcaaatcacgaacaaa 4290
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5686
Number of Sequences: 1807
Number of extensions: 5686
Number of successful extensions: 29
Number of sequences better than 1.0e-20: 1
length of query: 813
length of database: 10,358,551
effective HSP length: 16
effective length of query: 797
effective length of database: 10,329,639
effective search space: 8232722283
effective search space used: 8232722283
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)